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CGH-1 gonad

Germline and early embryonic gene expression

In the germline and early embryo, we are studying the functions of an RNA-protein complex and putative mRNA storage granules that contain the RNA binding proteins CGH-1 and CAR-1. These two proteins are conserved components of P bodies, cytoplasmic RNA-protein particles that serve as sites of decapping-dependent mRNA degradation, sequestration of translationally silenced mRNAs, and regulation by micro-RNAs. C. elegans provides a powerful system for studying P body functions and regulation in vivo. We are investigating how CGH-1/CAR-1 particles influence maternal mRNA metabolism and translational regulation during oogenesis, and in the early embryo. An interesting feature of CGH-1 and CAR-1 is that they are among a relatively small group of proteins that are required to prevent excessive levels of germ cell death by apoptosis. A conserved but little understood feature of germ cell development is that around the late pachytene stage of meiosis, a high proportion of developing oocytes undergo apoptosis. We believe that by investigating how this cell death is regulated, and is influenced by CGH-1 and CAR-1, we will elucidate aspects of germ cell development that are both important and conserved.

In the early C. elegans embryo, we have studied mechanisms that silence transcription globally in the germline precursor lineage, and have investigated how particular transcription regulators contribute to the unfolding of the new transcription repertoire. We are currently studying gene regulation events associated with oocyte maturation, a conserved process through which oocytes are stimulated to progress through the meiotic cell cycle, and are prepared for fertilization and the early stages of embryogenesis.



CGH-1 embryos
Papers:

2007

Walker AK, Boag PR, Blackwell TK. (2007) Transcription reactivation steps stimulated by oocyte maturation in C. elegans. Dev Biol. 2007 Apr 1;304(1):382-93. Epub 2006 Dec 23. [download PDF]

2006

Lehtinen MK, Yuan Z, Boag PR, Villen J, Becker EBE, DiBacco S, Yang Y, Gygi S, Blackwell TK, Bonni A. (2006) A conserved MST-FOXO signaling pathway mediates oxidative stress responses and extends lifespan. Cell 125, 987-1001. [download PDF]

Walker AK, Blackwell TK. (2006) Transcription Mechanisms. Wormbook, ed. The C. elegans Research Community, doi/10.1895/wormbook.1.121.1. [download PDF] Website: wormbook.org

2005:
Navarro RE, Blackwell TK. Requirement for P granules and meiosis for accumulation of the germline RNA helicase CGH-1. Genesis 2005; 42:172-180.

Boag PR, Nakamura A, Blackwell TK. A conserved RNA-protein complex component involved in physiological germline apoptosis regulation in C. elegans. Development 2005; 132:4975-86.

2004:

Walker AK, Shi Y, Blackwell TK. An extensive requirement for TFIID-specific TAF-1 in C. elegans embryonic transcription. J Biol Chem 2004; 279:15339-47.

Wang J-C, Walker AK, Blackwell TK, Yamamoto KR. The Caenorhabditis elegans ortholog of TRAP 240, CeTRAP240/let-19, selectively modulates gene expression and is essential for embryogenesis. J Biol Chem 2004; 279:29270-7.

2003:
Takagi T, Walker AK, Sawa C, Diehn F, Takase Y, Blackwell TK, Buratowski S. (2003) The Caenorhabditis elegans mRNA 5'-capping enzyme: In vitro and in vivo characterization. J. Biol. Chem., 278, 14174-14184.

Walker AK, Blackwell TK. (2003) A broad but restricted requirement for TAF-5 (hTAFII100) for embryonic transcription in C. elegans. J. Biol. Chem., 278, 6181-6. [download PDF]

Zhang F, Barboric M, Blackwell, TK, Peterlin, BM. (2003) A model of repression: CTD analogs, and PIE-1 inhibit transcriptional elongation by P-TEFb. Genes Dev., 17, 748-758.

2002:
Shim EY, Walker AK, Blackwell TK. (2002) Broad requirement for the Mediator subunit RGR-1 for transcription in the C. elegans embryo. J. Biol. Chem., 277, 30413-30416. [download PDF]

Shim EY, Walker AK, Shi Y, Blackwell TK. (2002) CDK-9/Cyclin T (P-TEFb) is required in two post-initiation pathways for transcription in the C. elegans embryo. Genes Dev., 16, 2135-2146.


2001:
Walker AK, Rothman JH, Shi Y, Blackwell TK. (2001) Distinct requirements
for C. elegans TAFIIs in embryonic transcription. EMBO Journal,
20, 5269-5279.

Navarro RE, Shim EY, Kohara Y, Singson A, Blackwell TK. (2001) CGH-1: a conserved predicted RNA helicase required for gametogenesis and protection from physiological germline apoptosis in C. elegans. Development, 128, 3221-3232 (cover article).

1999:
Batchelder C, Dunn, MA, Choy B, Suh Y, Cassie C, Shim EY, Shin TH, Mello C, Seydoux, G, Blackwell TK. (1999) Transcriptional repression by the Caenorhabditis elegans germline protein PIE-1. Genes Dev. 13, 202-212.

CGH-1 gonad


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